Details for DC_M01_20201006
Date & time:
Animal subject: DC_M01
Investigator: Mihály Voroslakos
Experimenters: Mihály Voroslakos
Project: Metal microdrive and head cap system for silicon probe recovery in freely moving rodent
Data repositories: NYUshare_Datasets, download session from Web share
Created: 2020-12-19 17:37:35 by Peter Petersen
Updated: 2020-12-19 17:52:54 by Peter PetersenNotes:
Epochs
| Epochs | Behavioral paradigm | Maze type | Built maze | Manipulation | Duration | Notes |
|---|---|---|---|---|---|---|
| pre_homecage_201006_090834 | Homecage_Sleep | Homecage | Homecage_Mouse | |||
| stimulation_201006_102655 | Electrical stimulation | |||||
| post_homecage_201006_114734 | Homecage_Sleep | Homecage | Homecage_Mouse |
Extracellular
Equipment |
File format |
Sampling rate |
nSamples |
nChannels |
Spike groups |
Least significant bit |
|---|---|---|---|---|---|---|
| Intan Technologies, RHD2000 USB interface board (256ch) | 20000 | 343272000 | 32 | 4 | 0.195 |
Implanted probes
Spike groups
Spike groups are typically defined by the group of channels within shanks. Channels are listed and comma-separated and labels can further be assigned to each group. Channels are 0-indexed.
Group |
Channels |
Label |
|---|---|---|
| 1 | 21, 24, 28, 26, 22 | |
| 2 | 29, 17, 32, 31 | |
| 3 | 16, 4, 1, 13, 15, 3, 2 | |
| 4 | 12, 8, 5, 9, 11, 7, 6, 10 |
This section is dedicated to extra inputs besides the primary recording channels. For extracellular recordings this includes any extra analog and digital channels. Further it can be inputs saved with an Arduino or Raspberry pi or an entirely different hardware solution.
Equipment |
Input type |
Channel |
Tag |
Description |
|---|
Equipment |
File names |
Epoch |
Type |
Framerate |
Notes |
|---|
Brain regions are defined according to the Allen Institute Atlas. A brain region can be assigned to a list of channels or spike groups.
Brain region |
Channels |
Spike groups |
|---|---|---|
| ACA – Anterior cingulate area (View in Atlas) | 32 |
Channel tags
Examples and reserved tags: Bad, Good, Theta, Gamma, Delta, Ripple, RippleNoise.
Tag |
Channels |
Spike groups |
|---|---|---|
| Bad | 14, 18, 19, 20, 23, 25, 27, 30 |
Analysis tags
Tag |
Value |
Description |
|---|
Spike sorting
Method |
Format |
Relative path |
Channels |
Spike sorter |
Notes |
Sorting completed |
Units count |
Sorting ID |
|---|---|---|---|---|---|---|---|---|
| KiloSort | Phy | Kilosort_2020-10-07_100802 | Yes | 0 | 65759 |
Spike sorted units
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