Details for Cicero_09102014

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  • Date & time: 2014-09-10,

  • Location: Alexandria

  • Animal subject: Cicero

  • Investigator: Andres Grosmark

  • Experimenters: Andres Grosmark

  • Project: CRCNS Hippocampus: hc-11

  • Data repositories: NYUshare_Datasets, download session from Web share

  • Created: 2020-02-01 20:45:45 by Peter Petersen ADMIN
    Updated: 2020-06-27 19:11:01 by Peter Petersen ADMIN

  • Notes:

Epochs

Epochs Behavioral paradigm Maze type Built maze Manipulation Duration Notes
Cicero_09102014_01 Homecage_Sleep Homecage Homecage_Rat
Cicero_09102014_02 CircularTrack_EndToEnd Circular track Circular_track_Andres
Cicero_09102014_03 Homecage_Sleep Homecage Homecage_Rat

Extracellular

Equipment

File format

Sampling rate

nSamples

nChannels

Spike groups

Least significant bit

Amplipex, KJE-1001 256 Channel system dat 20000 134 14 0.3815

Implanted probes

Spike groups

Spike groups are typically defined by the group of channels within shanks. Channels are listed and comma-separated and labels can further be assigned to each group. Channels are 0-indexed.

Group

Channels

Label

1 1, 2, 3, 4, 5, 6, 7, 8, 9, 10
2 11, 12, 13, 14, 15, 16, 17, 18, 19, 20
3 21, 22, 23, 24, 25, 26, 27, 28, 29, 30
4 31, 32, 33, 34, 35, 36, 37, 38, 39, 40
5 41, 42, 43, 44, 45, 46, 47, 48, 49, 50
6 51, 52, 53, 54, 55, 56, 57, 58, 59, 60
7 61, 62, 63, 64
8 65, 66, 67, 68, 69, 70, 71, 72, 73, 74
9 75, 76, 77, 78, 79, 80, 81, 82, 83, 84
10 85, 86, 87, 88, 89, 90, 91, 92, 93, 94
11 95, 96, 97, 98, 99, 100, 101, 102, 103, 104
12 105, 106, 107, 108, 109, 110, 111, 112, 113, 114
13 115, 116, 117, 118, 119, 120, 121, 122, 123, 124
14 125, 126, 127, 128
This section is dedicated to extra inputs besides the primary recording channels. For extracellular recordings this includes any extra analog and digital channels. Further it can be inputs saved with an Arduino or Raspberry pi or an entirely different hardware solution.

Equipment

Input type

Channel

Tag

Description


Equipment

File names

Epoch

Type

Framerate

Notes

Video 39

Brain regions are defined according to the Allen Institute Atlas. A brain region can be assigned to a list of channels or spike groups.

Brain region

Channels

Spike groups

CA1 – Field CA1 (View in Atlas)

Channel tags

Examples and reserved tags: Bad, Good, Theta, Gamma, Delta, Ripple, RippleNoise.

Tag

Channels

Spike groups


Analysis tags

Tag

Value

Description


Spike sorting

Method

Format

Relative path

Channels

Spike sorter

Notes

Sorting completed

Units count

Sorting ID

Klustakwik Neurosuite Andres Grosmark Yes 0 51636

Spike sorted units

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