Brain regions

All brain regions in the database are according to the Allen Mouse Brain Atlas Ontologies. For a full structure graph definition, go to the atlas.

Brain region acronym

Name and link

Descriptions

MOBopl MOBopl – Main olfactory bulb, outer plexiform layer
AOB AOB – Accessory olfactory bulb
AOBgr AOBgr – Accessory olfactory bulb, granular layer
AOBmi AOBmi – Accessory olfactory bulb, mitral layer
PERI1 PERI1 – Perirhinal area, layer 1
PERI PERI – Perirhinal area
TEa6a TEa6a – Temporal association areas, layer 6a
TEa6b TEa6b – Temporal association areas, layer 6b
PERI2/3 PERI2/3 – Perirhinal area, layer 2/3
PERI5 PERI5 – Perirhinal area, layer 5
PERI6a PERI6a – Perirhinal area, layer 6a
PERI6b PERI6b – Perirhinal area, layer 6b
ECT ECT – Ectorhinal area
ECT1 ECT1 – Ectorhinal area/Layer 1
ECT2/3 ECT2/3 – Ectorhinal area/Layer 2/3
ECT5 ECT5 – Ectorhinal area/Layer 5
VISrl4 VISrl4 – Rostrolateral area, layer 4
VISrl2/3 VISrl2/3 – Rostrolateral area, layer 2/3
VISrl1 VISrl1 – Rostrolateral area, layer 1
VISrl6a VISrl6a – Rostrolateral area, layer 6a
VISrl6b VISrl6b – Rostrolateral area, layer 6b
TEa TEa – Temporal association areas
VISrl5 VISrl5 – Rostrolateral area, layer 5
TEa5 TEa5 – Temporal association areas, layer 5
TEa4 TEa4 – Temporal association areas, layer 4
TEa2/3 TEa2/3 – Temporal association areas, layer 2/3
TEa1 TEa1 – Temporal association areas, layer 1
VISa6b VISa6b – Anterior area, layer 6b
VISa6a VISa6a – Anterior area, layer 6a
VISa5 VISa5 – Anterior area, layer 5