Brain regions

All brain regions in the database are according to the Allen Mouse Brain Atlas Ontologies. For a full structure graph definition, go to the atlas.

Brain region acronym

Name and link

Descriptions

I5 I5 – Intertrigeminal nucleus
SSN SSN – Superior salivatory nucleus
LTN LTN – Lateral tegmental nucleus
PDTg PDTg – Posterodorsal tegmental nucleus
PC5 PC5 – Parvicellular motor 5 nucleus
PG PG – Pontine gray
PCG PCG – Pontine central gray
P5 P5 – Peritrigeminal zone
PRNv PRNv – Pontine reticular nucleus, ventral part
SG SG – Supragenual nucleus
TRN TRN – Tegmental reticular nucleus
SUT SUT – Supratrigeminal nucleus
PBmm PBmm – Parabrachial nucleus, medial division, medial medial part
PBme PBme – Parabrachial nucleus, medial division, external medial part
SOC SOC – Superior olivary complex
DTN DTN – Dorsal tegmental nucleus
PBlv PBlv – Parabrachial nucleus, lateral division, ventral lateral part
POR POR – Superior olivary complex, periolivary region
SOCm SOCm – Superior olivary complex, medial part
PBmv PBmv – Parabrachial nucleus, medial division, ventral medial part
PBm PBm – Parabrachial nucleus, medial division
PBls PBls – Parabrachial nucleus, lateral division, superior lateral part
SOCl SOCl – Superior olivary complex, lateral part
P-mot P-mot – Pons, motor related
B B – Barrington’s nucleus
PBle PBle – Parabrachial nucleus, lateral division, external lateral part
P P – Pons
NLLh NLLh – Nucleus of the lateral lemniscus, horizontal part
PSV PSV – Principal sensory nucleus of the trigeminal
PB PB – Parabrachial nucleus